1.3.6.1.4.1.19376.1.3.1.5

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Laboratory Isolate Organizer 1.3.6.1.4.1.19376.1.3.1.5

Laboratory Organizer, when present, shall be recorded as an organizer in an entryRelationship under the Laboratory data processing entry (1.3.6.1.4.1.19376.1.3.1) as demonstrated in the figure below. This module is out of the XDS-Lab Specification. This module does not change requirements stated in that specification but is structured as a module to ensure consistent content representation and re-usability.

The figure below shows how the information for this element is coded, and further constraints are provided in the following sections.

Standards

CRS	HL7 Care Record Summary

Uses

See Templates using Laboratory Isolate Organizer

Specification

Laboratory Isolate Organizer Example

<ClinicalDocument
  ...
  <component typeCode="COMP">
    <structuredBody classCode="DOCBODY" moodCode="EVN">
      <component typeCode="COMP">
        <section classCode="DOCSECT">
          ...
          <entry typeCode="DRIV">
            <templateId extension="Lab.Report.Data.Processing.Entry" root="1.3.6.1.4.1.19376.1.3.1"/>
            <act classCode="ACT" moodCode="EVN">
              ...
              <entryRelationship typeCode="COMP">
                <organizer classCode="CLUSTER" moodCode="EVN">
                  <templateId root="1.3.6.1.4.1.19376.1.3.1.5"/>
                  <statusCode code="completed"/>
                  <effectiveTime value="20071108000000.0000-0500"/>
                  <specimen>
                    <specimenRole classCode="ISLT">
                      <specimenPlayingEntity>
                        <code code="79153007" codeSystem="2.16.840.1.113883.6.96" codeSystemName="SNOMED-CT" 
                          displayName="Salmonella tennessee 6,7,14;z29;1,2,7">
                          <translation xsi:type="CE" code="L-17601" codeSystem="2.16.840.1.113883.6.96" codeSystemName="SNOMED" 
                            displayName="Salmonella tennessee 6,7,14;z29;1,2,7"/>

<templateId root='1.3.6.1.4.1.19376.1.3.1.5'/>

The <templateId> element identifies this <organizer> as the Laboratory Isolate Organizer. The templateId shall be recorded as shown above, root='1.3.6.1.4.1.19376.1.3.1.5'.

<statusCode code=" "/>

The status shall be either "completed" or "obsolete". A status of completed is expected. A status of obsolete means the isolation identification has been replaced by a newer identification (following it) in this revision of the report.

NOTE: Lab TF does not address the use of statusCode - needs discussion.

<effectiveTime value=" "/>

The isolation's relevant clinical time (ideally specimen collection time) MAY be present.

<specimen><specimenRole classCode="ISLT"><specimenPlayingEntity>...</specimen>

The specimenRole shall be "ISLT" and the organism shall be coded with at least one unique international vocabulary.