Minutes: Difference between revisions

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<center>'''IHE Anatomic Pathology Domain F2F Meeting'''</center>


<center>'''August 5-6, 2013 Paris'''</center>
'''Attending:'''
{| class="prettytable"
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'''Participants IHE AP'''
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<center>'''August 5'''</center>
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<center>'''August 6'''</center>
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<center>'''Organization'''</center>
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David Booker
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<center>X</center>
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<center>X</center>
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College of American Pathologists/LabMedicine PC
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Christel Daniel
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<center>X</center>
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<center>X</center>
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CCS Domaine Patient - AP-HP - INSERM
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Raj Dash
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<center>X</center>
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<center>X</center>
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College of American Pathologists/Duke University
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Gunter Haroske
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<center>X</center>
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<center>X</center>
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Institute für Pathologie
KH Dresden-Friedrichstadt
HU Berlin Charite
FH Brandenburg
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Mary Kennedy
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<center>X</center>
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<center>X</center>
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College of American Pathologists
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Jacques Klossa
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<center>X</center>
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<center>X</center>
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Telepathology2014
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François Macary
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<center>X</center>
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<center>X</center>
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ASIP Santé
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Thomas Schrader
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<center>X</center>
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<center>X</center>
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Institute für Pathologie
KH Dresden-Friedrichstadt
HU Berlin Charite
FH Brandenburg
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Riccardo Triunfo
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<center>X</center>
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<center>X</center>
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CRS4
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Gianluigi Zanetti
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<center>X</center>
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<center>X</center>
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CRS4
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'''NOTE: Presentations referenced can be found on the IHE AP Domain wiki site: '''
'''[http://wiki.ihe.net/index.php?title=Anatomic_Pathology http://wiki.ihe.net/index.php?title=Anatomic_Pathology''']
'''Agenda Items'''
* IHE Lab Overview
* APSR release 2013
* Change proposal modification to incorporate APSR
* Incorporation of Molecular Pathology/Genomics Requirements
* Strategy Session Initiation
* Telepathology
* Organization of Future Meetings
'''Action Items'''
{| class="prettytable"
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'''<nowiki>#</nowiki>'''
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'''Item'''
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'''Responsible'''
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'''Status'''
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1
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Contact Chris Carr to determine if IHE has an IHTSDO namespace we could use
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Mary
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Open
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2
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Determine if IHE needs permission from AJCC to use TNM terms in APSR
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Mary
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Open
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3
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Create change proposal for APSR
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Thomas / Gunter
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Completed (see document)
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4
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Request LOINC codes for Observation codes for APSR
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TBD
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Open
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5
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Create a model for workflow use case
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Gianluigi/Riccardo
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November
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6
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Create a use case for image reporting to be merged into CRS4 profile proposal
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Jacques
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November
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7
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Send out call for new proposals
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Co-chairs/Mary
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November
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8
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Update IHE Domain page
(change Trial Implementation RePub Request to 2013-10-31,etc.)
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Mary
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November
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9
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Creation of examples of cancer/non-cancer (eg, breast/prostate; fibroadenoma) to be developed by France/Germany/US
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Christel/Thomas/Raj
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November
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10
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Write summary of discussion and contact Epic development
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Raj
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November
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11
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Develop mapping of values based on text using Excel template (Christel will share prototype Excel File)
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Christel
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Completed
|}
'''Minutes'''
# Welcome/Introductions
## No domain sponsor announcements; however, the IHE AP meeting roster was updated.
## Agenda reviewed and approved
## Objectives of meeting:
###  Enumerate current projects and statuses
###  Lower barrier to incorporation of concepts into SNOMED CT
### Identify ways to incorporate multinational vendor engagement
# Overview of IHE Lab work (Francois)
## ILW has a change proposal from Harry Solomon that could be used for AP
### Telepathology consultation
## Lab Code Set distribution profile (IPI domain?) (Francois to share?)
### LOINC recommended (Japan incorporating LOINC)
### JLAC-10 Japanese required coding system 
## Implementation of IHE Lab profiles in France
### XD-LAB accepted as national framework for France
#### Lab reports need to be conformant to XD-Lab to go into EHR
#### LTW (APHP); LCSD and LTW deployed in France
#### LOINC has been selected for France and has been partially translated in French (20,000 codes to date)
# CRS4 presentation: Can/How do we put data intensive biology in the picture? (see presentation)(Riccardo/Gianluigi)
## CRS4 is an interdisciplinary, not for profit research center focused on computational sciences
## Focus on clinical domain interconnection and traceability; semantic and computable management of biomedical data; telemedicine and distributed medicine
## Main IHE experience in the IHE Lab and ITI domains
### Technical framework supplement for lab specimen barcode labeling
### One CRS4 monitor at Connectathon 2013   
## Currently dealing with production, managing and analysis of data intensive biology outputs (NGS, proteomics, etc) and moving toward confluence with digital pathology
### Support to large scale population studies
### Genetic therapy quality control
## Building a biobank system
### To provide consistent computable platform
### To support scalable error propagation/graph of dependency data model
## Industrial consulting
### Pre-analytic automation and clinical lab automation systems
## Support to regional healthcare systems
### HL7/IHE integration
### Clinical processes modeling
### Real time telemedicine systems
## Reasons for approaching IHE AP domain WG:
### Research interests and their intersection
### Is there a basis for a new IHE profile for this?
### New profile could fuse data intensive molecular biology with digital pathology using extensive automation of pathology lab (tissue transport; processing; imaging; NGS and mass spectrometry; archive and storage)
### A new profile could also include ordering ancillary techniques and molecular biology (Review IHE Lab automation profile/LAW)
## New profile needs to address the following
### Ways to do referencing
### Expressions to show that result is tied to a specific area of a specific specimen
### How to deal with links
### Reference implementation
### Need for a model for workflow (Gianluigi/Riccardo to write use case)
### Need for a use case to show integration with AP
### Will need to review previous DICOM work on workflow
### Develop a use case for image reporting that can be merged into the profile (Jacques)
# APSR overview of current work (see presentation)(Francois/Christel)
## APSR in a CDA format
### Six 1st level sections
### Only one mandatory and mandating structured data elements
## Handling “none” in an observation of the &lt;entry&gt;
### “None” and “None known” represent effective values which are part of the value sets attached to the observation
## Handling missing information in an observation of the &lt;entry&gt;
### These situations are handled with the nullFlavor attribute
## Handling unexpected information in an observation of the &lt;entry&gt;
### “Other, specify” – The actual value does not belong to the assigned value set and the author of the report provides this ''foreign value''
### The value set is open to extensions
### No code is available in any terminology for the value observed
## New APSR templates
### Ten new templates representing cancers
# APSR change proposal discussion (see presentation)(Thomas/Gunter)
## Background for German/Austrian proposal
### HL7 background reviewed
### HL7 Germany has solutions for reporting to cancer registries using generic TNM and ICD-O
### Uses Detailed Clinical Models (DCM)
### Recommend using a generic model of meaning vs perpetuated specific observations (DCM)
### Organ specific templates well suited for data entry and communication but are not suited for system maintenance
### Can be supported by CDA
### PathLex is logical consequence of organ specific template approach but causes unnecessary multiplication of terms
## Proposed changes to APSR by German/Austrian workgroup:
### Create HL7 generic model value for concepts (eg, TNM; tumor descriptions; assessment scales;)
### Open APSR 05 and replace by TNM/ICD-O German, with consecutive changes in PathLex
### Cancel 4.1.2.2 organ-specific APSR document content modules with consecutive changes in PathLex
### Create generic document modules and templates only and organ-specific templates are now part of the appendix to be used for example, as blueprints for data entry forms (checklist functionality)
### Re-launch of an ontology based PathLex (for AP observations)
### Need to differentiate between terminology models, specimen and problem organizers
### Advantages to this approach are few, easy to implement generic templates that can be reused in other profiles (eg, QRPH-Ca; XDS-MS)
### Separate validation using schematron can be used
### Would need approximately 15 required elements in total
## Discussion of new proposal/next steps
### Acceptance of concept of a more generic model
### Current APSR files will be used as examples
### Thomas/Gunter to submit a change proposal (see document)
### Determine if IHE needs agreement with AJCC to use TNM in a profile
### Decision is to accept many proposed changes
### A generic model for APSR will be created and the appendix will contain examples of specific malignant and benign conditions
### The general structure of APSR will not change and follows the CDA hierarchical tree of section, entries, organizers
### Need to correlate radiology/pathology diagnosis (Birads)(Tumor board templates within IHE France may serve as a model)
### Examples of cancer/non-cancer (eg breast/prostate ca; fibroadenoma) will be developed by France/Germany/US (Chirstel/Thomas/Raj)
### Share mapping of values based on text using Excel template (Christel will share prototype Excel file)(see spreadsheet)
### Write summary of discussion and contact Epic development (Raj)
Note: A change proposal was submitted by Thomas/Gunter post-meeting.  Christel reviewed and edited the CP.  (See document). Further discussion of the CP and final determination will occur on the next IHE AP conference call.
# APSR/CDISC (Christel)
## Possible collaboration with CDISC
## Clinical Data Warehouse and i2B2
## Unicare – clinical data warehouse
## Uses IHE QRPH Exchange profile
## Should we collaborate with CDISC SHARE OPEN project?
## Christel will forward information of next IHE AP conference call
# IHTSDO/SNOMED CT and AJCC
## Discussion regarding APSR example concepts (eg, cancer staging)
## PathLex developed as stop gap for concepts without SCT codes
## Should we build an SCT extension for concepts not covered in SCT?
### Determine if IHE has an IHTSDO namespace (Mary)
### Draft proposal for assignment of extension namespace to IHE vs IHE AP or draft joint proposal with IPaLM SIG and submit from within the IHTSDO governance
### Alternatively, use LOINC codes immediately for observation names until such time as a SNOMED CT option is available
## AJCC / UICC discussion
### Determine if an IP agreement is needed between staging organizations and IHE
### Use LOINC codes until such time as IP agreement established
## Further discussion is needed on next steps
## Discussion of Procedure/Specimen Type
### Review Marcial’s work (possibly have him present on next conference call)
# 12th European Congress on Digital Pathology
## Formerly “12th European Congress on Telepathology and 6th International Congress on Virtual Microscopy”
## To be held in Paris 18-21 June 2014
## Plan on a joint DICOM 26/IHE AP F2F
## All are encouraged to attend (see brochure)
# New business
## Send out call for new proposals
## Need to update the IHE Domain page (Trial Implementation RePub Request; Call for Proposals; Proposal Deadline; # of white papers)
# Next IHE AP Meetings
## Next conference call November 12 (9am Central US)??
## F2F meeting planned for Paris around June 18-21, 2014
## Proposed F2F to take place during 12th European Congress on Digital Pathology meeting

Latest revision as of 03:03, 12 February 2025