Difference between revisions of "1.3.6.1.4.1.19376.1.3.1.5"
| Line 1: | Line 1: | ||
| − | Return to: [[ | + | Return to:[[PCC_TF-1/PHLAB/XDSLAB_Harmonization | XDS-LAB Harmonization]] |
<br> | <br> | ||
| − | Return to: [[1.3.6.1.4.1.19376.1.3.1|Laboratory Data Processing Entry]] | + | Return to:[[1.3.6.1.4.1.19376.1.3.1| Laboratory Data Processing Entry]] |
{{HL7V3|Laboratory Isolate Organizer|1.3.6.1.4.1.19376.1.3.1.5|Trial| | {{HL7V3|Laboratory Isolate Organizer|1.3.6.1.4.1.19376.1.3.1.5|Trial| | ||
| − | |||
Laboratory Isolate Organizer, when present, SHALL be recorded as an <organizer> in an <entryRelationship> under the [[1.3.6.1.4.1.19376.1.3.1| Laboratory Data Processing Entry]] as demonstrated in the figure below. The figure below shows how the information for this element is coded, and further constraints are provided in the following sections. | Laboratory Isolate Organizer, when present, SHALL be recorded as an <organizer> in an <entryRelationship> under the [[1.3.6.1.4.1.19376.1.3.1| Laboratory Data Processing Entry]] as demonstrated in the figure below. The figure below shows how the information for this element is coded, and further constraints are provided in the following sections. | ||
|Example= | |Example= | ||
<pre> | <pre> | ||
<section classCode="DOCSECT"> | <section classCode="DOCSECT"> | ||
| + | <templateId extension="??" root="1.3.6.1.4.1.19376.1.3.3.2.1"/> | ||
... | ... | ||
<entry typeCode="DRIV"> | <entry typeCode="DRIV"> | ||
| Line 54: | Line 54: | ||
=====<organizer classCode="CLUSTER" moodCode="EVN">===== | =====<organizer classCode="CLUSTER" moodCode="EVN">===== | ||
| − | The Laboratory Isolate Organizer encapsulates an '''Isolate''', and contains the batteries and observations performed on that '''Isolate''', as well as the microorganism identification. It | + | The Laboratory Isolate Organizer encapsulates an '''Isolate''', and contains the batteries and observations performed on that '''Isolate''', as well as the microorganism identification. It SHALL be represented by an <organizer> element, with classCode="CLUSTER" moodCode="EVN". |
| − | =====<templateId root= | + | =====<templateId root="1.3.6.1.4.1.19376.1.3.1.5"/>===== |
| − | The <templateId> element identifies this <organizer> as a Laboratory Isolate Organizer. The templateId | + | The <templateId> element identifies this <organizer> as a Laboratory Isolate Organizer. The templateId SHALL be recorded as shown above, root="1.3.6.1.4.1.19376.1.3.1.5". |
=====<statusCode code=" "/>===== | =====<statusCode code=" "/>===== | ||
| Line 72: | Line 72: | ||
=====<id extension=" " root=" "/>===== | =====<id extension=" " root=" "/>===== | ||
| − | The '''Isolate''' unique identifier within the laboratory. | + | The '''Isolate''' MAY have a unique identifier from within the laboratory. |
=====<specimenPlayingEntity classCode="MIC">===== | =====<specimenPlayingEntity classCode="MIC">===== | ||
| Line 81: | Line 81: | ||
=====<component><observation classCode="OBS" moodCode="EVN">...</observation></component>===== | =====<component><observation classCode="OBS" moodCode="EVN">...</observation></component>===== | ||
| − | The Laboratory Observations performed on the '''Isolate'''. | + | The [[1.3.6.1.4.1.19376.1.3.1.6|Laboratory Observations]] performed on the '''Isolate'''. |
=====<component><organizer classCode="BATTERY" moodCode="EVN">...</organizer></component>===== | =====<component><organizer classCode="BATTERY" moodCode="EVN">...</organizer></component>===== | ||
| − | The Laboratory | + | The [[1.3.6.1.4.1.19376.1.3.1.4|Laboratory Battery Organizer]] performed on the '''Isolate'''. |
Revision as of 09:27, 18 June 2008
Return to: XDS-LAB Harmonization
Return to: Laboratory Data Processing Entry
Development Only
The PCC Wiki Content is used only for development of IHE PCC Content. The Normative content of the PCC Technical Framework and the current supplements can be found at http://www.ihe.net/Technical_Framework/index.cfm#PCC
Laboratory Isolate Organizer 1.3.6.1.4.1.19376.1.3.1.5
Laboratory Isolate Organizer, when present, SHALL be recorded as an <organizer> in an <entryRelationship> under the Laboratory Data Processing Entry as demonstrated in the figure below. The figure below shows how the information for this element is coded, and further constraints are provided in the following sections.
Uses
See Templates using Laboratory Isolate Organizer
Specification
<section classCode="DOCSECT">
<templateId extension="??" root="1.3.6.1.4.1.19376.1.3.3.2.1"/>
...
<entry typeCode="DRIV">
<templateId extension="Lab.Report.Data.Processing.Entry" root="1.3.6.1.4.1.19376.1.3.1"/>
<act classCode="ACT" moodCode="EVN">
...
<entryRelationship typeCode="COMP">
<organizer classCode="CLUSTER" moodCode="EVN">
<templateId extension="??" root="1.3.6.1.4.1.19376.1.3.1.5"/>
<statusCode code="completed"/>
<effectiveTime value="20071108000000.0000-0500"/>
<specimen typeCode="SPC">
<specimenRole classCode="ISLT">
<id extension="55584739" root="1.19.6.11.13"/>
<specimenPlayingEntity classCode="MIC">
<code code="79153007" codeSystem="2.16.840.1.113883.6.96" codeSystemName="SNOMED-CT"
displayName="Salmonella tennessee 6,7,14;z29;1,2,7"/>
</specimenPlayingEntity>
</specimenRole>
</specimen>
<component>
<observation classCode="OBS" moodCode="EVN">
<templateId extension="??" root="1.3.6.1.4.1.19376.1.3.1.6"/>
<code code="89029-0" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC"
displayName="Microbiology Culture"/>
...
</observation>
</component>
<component>
<organizer classCode="BATTERY" moodCode="EVN">
<templateId extension="??" root="1.3.6.1.4.1.19376.1.3.1.4"/>
<code code="29576-6" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC"
displayName="Microbiology Susceptibility">
...
</organizer>
</component>
...
</organizer>
</entryRelationship>
</act>
</entry>
</section>
|
<organizer classCode="CLUSTER" moodCode="EVN">
The Laboratory Isolate Organizer encapsulates an Isolate, and contains the batteries and observations performed on that Isolate, as well as the microorganism identification. It SHALL be represented by an <organizer> element, with classCode="CLUSTER" moodCode="EVN".
<templateId root="1.3.6.1.4.1.19376.1.3.1.5"/>
The <templateId> element identifies this <organizer> as a Laboratory Isolate Organizer. The templateId SHALL be recorded as shown above, root="1.3.6.1.4.1.19376.1.3.1.5".
<statusCode code=" "/>
The <statusCode> element SHALL be either "completed" or "obsolete". A status of completed is expected. A status of obsolete means the Isolate identification has been replaced by a newer identification (following it) in this revision of the report.
<effectiveTime value=" "/>
The Isolate's relevant clinical time (ideally specimen collection time) MAY be present.
<specimen typeCode="SPC">
The <specimen> SHALL have typeCode="SPC".
<specimenRole classCode="ISLT">
The <specimenRole> SHALL have classCode="ISLT".
<id extension=" " root=" "/>
The Isolate MAY have a unique identifier from within the laboratory.
<specimenPlayingEntity classCode="MIC">
The <specimenPlayingEntity> SHALL have classCode="MIC".
The <code> element SHALL identify the Isolate with a unique international vocabulary. The code, codeSystem, and displayName SHALL be present. You MAY also populate codeSystemName.
<component><observation classCode="OBS" moodCode="EVN">...</observation></component>
The Laboratory Observations performed on the Isolate.
<component><organizer classCode="BATTERY" moodCode="EVN">...</organizer></component>
The Laboratory Battery Organizer performed on the Isolate.