Difference between revisions of "Minutes"

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<center>'''IHE Anatomic Pathology Domain F2F Meeting'''</center>
 
  
<center>'''August 5-6, 2013 Paris'''</center>
 
 
 
 
'''Attending:'''
 
 
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'''Participants IHE AP'''
 
 
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<center>'''August 5'''</center>
 
 
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<center>'''August 6'''</center>
 
 
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<center>'''Organization'''</center>
 
 
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David Booker
 
 
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<center>X</center>
 
 
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<center>X</center>
 
 
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College of American Pathologists/LabMedicine PC
 
 
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Christel Daniel
 
 
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<center>X</center>
 
 
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<center>X</center>
 
 
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CCS Domaine Patient - AP-HP - INSERM
 
 
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Raj Dash
 
 
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<center>X</center>
 
 
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<center>X</center>
 
 
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College of American Pathologists/Duke University
 
 
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Gunter Haroske
 
 
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<center>X</center>
 
 
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<center>X</center>
 
 
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Institute für Pathologie
 
 
KH Dresden-Friedrichstadt
 
 
HU Berlin Charite
 
 
FH Brandenburg
 
 
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Mary Kennedy
 
 
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<center>X</center>
 
 
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<center>X</center>
 
 
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College of American Pathologists
 
 
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Jacques Klossa
 
 
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<center>X</center>
 
 
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<center>X</center>
 
 
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Telepathology2014
 
 
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François Macary
 
 
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<center>X</center>
 
 
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<center>X</center>
 
 
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ASIP Santé
 
 
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Thomas Schrader
 
 
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<center>X</center>
 
 
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<center>X</center>
 
 
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Institute für Pathologie
 
 
KH Dresden-Friedrichstadt
 
 
HU Berlin Charite
 
 
FH Brandenburg
 
 
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Riccardo Triunfo
 
 
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<center>X</center>
 
 
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<center>X</center>
 
 
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CRS4
 
 
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Gianluigi Zanetti
 
 
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<center>X</center>
 
 
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<center>X</center>
 
 
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CRS4
 
 
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'''NOTE: Presentations referenced can be found on the IHE AP Domain wiki site: '''
 
 
'''[http://wiki.ihe.net/index.php?title=Anatomic_Pathology http://wiki.ihe.net/index.php?title=Anatomic_Pathology''']
 
 
 
 
'''Agenda Items'''
 
 
* IHE Lab Overview
 
* APSR release 2013
 
* Change proposal modification to incorporate APSR
 
* Incorporation of Molecular Pathology/Genomics Requirements
 
* Strategy Session Initiation
 
* Telepathology
 
* Organization of Future Meetings
 
 
 
 
'''Action Items'''
 
 
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'''<nowiki>#</nowiki>'''
 
 
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'''Item'''
 
 
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'''Responsible'''
 
 
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'''Status'''
 
 
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1
 
 
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Contact Chris Carr to determine if IHE has an IHTSDO namespace we could use
 
 
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Mary
 
 
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Open
 
 
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2
 
 
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Determine if IHE needs permission from AJCC to use TNM terms in APSR
 
 
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Mary
 
 
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Open
 
 
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3
 
 
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Create change proposal for APSR
 
 
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Thomas / Gunter
 
 
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Completed (see document)
 
 
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4
 
 
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Request LOINC codes for Observation codes for APSR
 
 
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TBD
 
 
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Open
 
 
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5
 
 
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Create a model for workflow use case
 
 
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Gianluigi/Riccardo
 
 
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November
 
 
|-
 
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6
 
 
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Create a use case for image reporting to be merged into CRS4 profile proposal
 
 
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Jacques
 
 
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November
 
 
|-
 
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7
 
 
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Send out call for new proposals
 
 
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Co-chairs/Mary
 
 
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November
 
 
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8
 
 
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Update IHE Domain page
 
 
(change Trial Implementation RePub Request to 2013-10-31,etc.)
 
 
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Mary
 
 
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November
 
 
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9
 
 
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Creation of examples of cancer/non-cancer (eg, breast/prostate; fibroadenoma) to be developed by France/Germany/US
 
 
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Christel/Thomas/Raj
 
 
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November
 
 
|-
 
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10
 
 
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Write summary of discussion and contact Epic development
 
 
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Raj
 
 
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November
 
 
|-
 
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11
 
 
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Develop mapping of values based on text using Excel template (Christel will share prototype Excel File)
 
 
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Christel
 
 
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Completed
 
 
|}
 
 
 
'''Minutes'''
 
 
# Welcome/Introductions
 
## No domain sponsor announcements; however, the IHE AP meeting roster was updated.
 
## Agenda reviewed and approved
 
## Objectives of meeting:
 
###  Enumerate current projects and statuses
 
###  Lower barrier to incorporation of concepts into SNOMED CT
 
### Identify ways to incorporate multinational vendor engagement
 
# Overview of IHE Lab work (Francois)
 
## ILW has a change proposal from Harry Solomon that could be used for AP
 
### Telepathology consultation
 
## Lab Code Set distribution profile (IPI domain?) (Francois to share?)
 
### LOINC recommended (Japan incorporating LOINC)
 
### JLAC-10 Japanese required coding system 
 
## Implementation of IHE Lab profiles in France
 
### XD-LAB accepted as national framework for France
 
#### Lab reports need to be conformant to XD-Lab to go into EHR
 
#### LTW (APHP); LCSD and LTW deployed in France
 
#### LOINC has been selected for France and has been partially translated in French (20,000 codes to date)
 
# CRS4 presentation: Can/How do we put data intensive biology in the picture? (see presentation)(Riccardo/Gianluigi)
 
## CRS4 is an interdisciplinary, not for profit research center focused on computational sciences
 
## Focus on clinical domain interconnection and traceability; semantic and computable management of biomedical data; telemedicine and distributed medicine
 
## Main IHE experience in the IHE Lab and ITI domains
 
### Technical framework supplement for lab specimen barcode labeling
 
### One CRS4 monitor at Connectathon 2013   
 
## Currently dealing with production, managing and analysis of data intensive biology outputs (NGS, proteomics, etc) and moving toward confluence with digital pathology
 
### Support to large scale population studies
 
### Genetic therapy quality control
 
## Building a biobank system
 
### To provide consistent computable platform
 
### To support scalable error propagation/graph of dependency data model
 
## Industrial consulting
 
### Pre-analytic automation and clinical lab automation systems
 
## Support to regional healthcare systems
 
### HL7/IHE integration
 
### Clinical processes modeling
 
### Real time telemedicine systems
 
## Reasons for approaching IHE AP domain WG:
 
### Research interests and their intersection
 
### Is there a basis for a new IHE profile for this?
 
### New profile could fuse data intensive molecular biology with digital pathology using extensive automation of pathology lab (tissue transport; processing; imaging; NGS and mass spectrometry; archive and storage)
 
### A new profile could also include ordering ancillary techniques and molecular biology (Review IHE Lab automation profile/LAW)
 
## New profile needs to address the following
 
### Ways to do referencing
 
### Expressions to show that result is tied to a specific area of a specific specimen
 
### How to deal with links
 
### Reference implementation
 
### Need for a model for workflow (Gianluigi/Riccardo to write use case)
 
### Need for a use case to show integration with AP
 
### Will need to review previous DICOM work on workflow
 
### Develop a use case for image reporting that can be merged into the profile (Jacques)
 
# APSR overview of current work (see presentation)(Francois/Christel)
 
## APSR in a CDA format
 
### Six 1st level sections
 
### Only one mandatory and mandating structured data elements
 
## Handling “none” in an observation of the &lt;entry&gt;
 
### “None” and “None known” represent effective values which are part of the value sets attached to the observation
 
## Handling missing information in an observation of the &lt;entry&gt;
 
### These situations are handled with the nullFlavor attribute
 
## Handling unexpected information in an observation of the &lt;entry&gt;
 
### “Other, specify” – The actual value does not belong to the assigned value set and the author of the report provides this ''foreign value''
 
### The value set is open to extensions
 
### No code is available in any terminology for the value observed
 
## New APSR templates
 
### Ten new templates representing cancers
 
# APSR change proposal discussion (see presentation)(Thomas/Gunter)
 
## Background for German/Austrian proposal
 
### HL7 background reviewed
 
### HL7 Germany has solutions for reporting to cancer registries using generic TNM and ICD-O
 
### Uses Detailed Clinical Models (DCM)
 
### Recommend using a generic model of meaning vs perpetuated specific observations (DCM)
 
### Organ specific templates well suited for data entry and communication but are not suited for system maintenance
 
### Can be supported by CDA
 
### PathLex is logical consequence of organ specific template approach but causes unnecessary multiplication of terms
 
## Proposed changes to APSR by German/Austrian workgroup:
 
### Create HL7 generic model value for concepts (eg, TNM; tumor descriptions; assessment scales;)
 
### Open APSR 05 and replace by TNM/ICD-O German, with consecutive changes in PathLex
 
### Cancel 4.1.2.2 organ-specific APSR document content modules with consecutive changes in PathLex
 
### Create generic document modules and templates only and organ-specific templates are now part of the appendix to be used for example, as blueprints for data entry forms (checklist functionality)
 
### Re-launch of an ontology based PathLex (for AP observations)
 
### Need to differentiate between terminology models, specimen and problem organizers
 
### Advantages to this approach are few, easy to implement generic templates that can be reused in other profiles (eg, QRPH-Ca; XDS-MS)
 
### Separate validation using schematron can be used
 
### Would need approximately 15 required elements in total
 
## Discussion of new proposal/next steps
 
### Acceptance of concept of a more generic model
 
### Current APSR files will be used as examples
 
### Thomas/Gunter to submit a change proposal (see document)
 
### Determine if IHE needs agreement with AJCC to use TNM in a profile
 
### Decision is to accept many proposed changes
 
### A generic model for APSR will be created and the appendix will contain examples of specific malignant and benign conditions
 
### The general structure of APSR will not change and follows the CDA hierarchical tree of section, entries, organizers
 
### Need to correlate radiology/pathology diagnosis (Birads)(Tumor board templates within IHE France may serve as a model)
 
### Examples of cancer/non-cancer (eg breast/prostate ca; fibroadenoma) will be developed by France/Germany/US (Chirstel/Thomas/Raj)
 
### Share mapping of values based on text using Excel template (Christel will share prototype Excel file)(see spreadsheet)
 
### Write summary of discussion and contact Epic development (Raj)
 
 
Note: A change proposal was submitted by Thomas/Gunter post-meeting.  Christel reviewed and edited the CP.  (See document). Further discussion of the CP and final determination will occur on the next IHE AP conference call.
 
 
# APSR/CDISC (Christel)
 
## Possible collaboration with CDISC
 
## Clinical Data Warehouse and i2B2
 
## Unicare – clinical data warehouse
 
## Uses IHE QRPH Exchange profile
 
## Should we collaborate with CDISC SHARE OPEN project?
 
## Christel will forward information of next IHE AP conference call
 
# IHTSDO/SNOMED CT and AJCC
 
## Discussion regarding APSR example concepts (eg, cancer staging)
 
## PathLex developed as stop gap for concepts without SCT codes
 
## Should we build an SCT extension for concepts not covered in SCT?
 
### Determine if IHE has an IHTSDO namespace (Mary)
 
### Draft proposal for assignment of extension namespace to IHE vs IHE AP or draft joint proposal with IPaLM SIG and submit from within the IHTSDO governance
 
### Alternatively, use LOINC codes immediately for observation names until such time as a SNOMED CT option is available
 
## AJCC / UICC discussion
 
### Determine if an IP agreement is needed between staging organizations and IHE
 
### Use LOINC codes until such time as IP agreement established
 
## Further discussion is needed on next steps
 
## Discussion of Procedure/Specimen Type
 
### Review Marcial’s work (possibly have him present on next conference call)
 
# 12th European Congress on Digital Pathology
 
## Formerly “12th European Congress on Telepathology and 6th International Congress on Virtual Microscopy”
 
## To be held in Paris 18-21 June 2014
 
## Plan on a joint DICOM 26/IHE AP F2F
 
## All are encouraged to attend (see brochure)
 
# New business
 
## Send out call for new proposals
 
## Need to update the IHE Domain page (Trial Implementation RePub Request; Call for Proposals; Proposal Deadline; # of white papers)
 
# Next IHE AP Meetings
 
## Next conference call November 12 (9am Central US)??
 
## F2F meeting planned for Paris around June 18-21, 2014
 
## Proposed F2F to take place during 12th European Congress on Digital Pathology meeting
 

Revision as of 12:59, 2 April 2015